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FUT5 fucosyltransferase 5 [ Homo sapiens (human) ]

Gene ID: 2527, updated on 11-Jun-2021

Summary

Official Symbol
FUT5provided by HGNC
Official Full Name
fucosyltransferase 5provided by HGNC
Primary source
HGNC:HGNC:4016
See related
Ensembl:ENSG00000130383 MIM:136835
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FUC-TV
Expression
Biased expression in colon (RPKM 6.2), esophagus (RPKM 5.3) and 8 other tissues See more
Orthologs
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Genomic context

See FUT5 in Genome Data Viewer
Location:
19p13.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (5865826..5870540, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (5865837..5870551, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 6 Neighboring gene uncharacterized LOC101928844 Neighboring gene fucosyltransferase 3 (Lewis blood group) Neighboring gene Sharpr-MPRA regulatory region 10376 Neighboring gene NADH:ubiquinone oxidoreductase subunit A11 Neighboring gene Sharpr-MPRA regulatory region 9916

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in L-fucose catabolic process NAS
Non-traceable Author Statement
more info
PubMed 
involved_in carbohydrate metabolic process TAS
Traceable Author Statement
more info
PubMed 
involved_in ceramide metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in fucosylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in oligosaccharide biosynthetic process TAS
Traceable Author Statement
more info
 
involved_in oligosaccharide metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 
involved_in protein glycosylation TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus TAS
Traceable Author Statement
more info
PubMed 
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi membrane TAS
Traceable Author Statement
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT5
Names
3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT5
alpha (1,3) fucosyltransferase
alpha-(1,3)-fucosyltransferase 5
fucT-V
fucosyltransferase V
galactoside 3-L-fucosyltransferase
NP_002025.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_002034.2NP_002025.2  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT5

    Status: VALIDATED

    Source sequence(s)
    AC024592
    Consensus CDS
    CCDS12154.1
    UniProtKB/Swiss-Prot
    Q11128
    UniProtKB/TrEMBL
    K7ENC0
    Related
    ENSP00000466880.1, ENST00000588525.1
    Conserved Domains (2) summary
    pfam00852
    Location:202370
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:73183
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    5865826..5870540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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