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SCAB_RS12820 helix-turn-helix transcriptional regulator [ Streptomyces scabiei 87.22 ]

Gene ID: 24309307, updated on 15-Apr-2023

Summary

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Gene symbol
SCAB_RS12820
Gene description
helix-turn-helix transcriptional regulator
Locus tag
SCAB_RS12820
Gene type
protein coding
Organism
Streptomyces scabiei 87.22 (strain: 87.22)
Lineage
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces
Old locus tag
SCAB_27031
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Genomic context

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Sequence:
NC_013929.1 (3076507..3079431, complement)

NC_013929.1Genomic Context describing neighboring genes Neighboring gene helix-turn-helix domain-containing protein Neighboring gene serine/threonine-protein kinase Neighboring gene phosphoglycerate dehydrogenase Neighboring gene ketol-acid reductoisomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013929.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions. Bignell DR, et al. Mol Plant Microbe Interact, 2010 Feb. PMID 20064060

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
helix-turn-helix transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013929.1 Reference assembly

    Range
    3076507..3079431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_013000488.1 helix-turn-helix transcriptional regulator [Streptomyces scabiei]

    See identical proteins and their annotated locations for WP_013000488.1

    UniProtKB/TrEMBL
    C9Z597
    Conserved Domains (2) summary
    COG2197
    Location:882 → 972
    CitB; DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]
    TIGR03903
    Location:9 → 633
    TOMM_kin_cyc; TOMM system kinase/cyclase fusion protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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