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SPRG_10988 hypothetical protein [ Saprolegnia parasitica CBS 223.65 ]

Gene ID: 24133068, updated on 9-Nov-2023

Summary

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Gene symbol
SPRG_10988
Gene description
hypothetical protein
Locus tag
SPRG_10988
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Saprolegnia parasitica CBS 223.65 (strain: CBS 223.65)
Lineage
Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Saprolegnia
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Genomic context

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Location:
chromosome: Unknown
Exon count:
8

NW_012156470.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012156470.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distinctive expansion of potential virulence genes in the genome of the oomycete fish pathogen Saprolegnia parasitica. Jiang RH, et al. PLoS Genet, 2013 Jun. PMID 23785293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_012156470.1 Reference assembly

    Range
    57963..59722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012351200.1 → XP_012206590.1  hypothetical protein SPRG_10988 [Saprolegnia parasitica CBS 223.65]

    See identical proteins and their annotated locations for XP_012206590.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A067BWQ2
    Conserved Domains (3) summary
    cd02958
    Location:150 → 262
    UAS; UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. ...
    pfam14555
    Location:1 → 35
    UBA_4; UBA-like domain
    cl00155
    Location:347 → 423
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
Heading Accession and Version

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