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Fam124b family with sequence similarity 124, member B [ Mus musculus (house mouse) ]

Gene ID: 241128, updated on 30-Apr-2024

Summary

Official Symbol
Fam124bprovided by MGI
Official Full Name
family with sequence similarity 124, member Bprovided by MGI
Primary source
MGI:MGI:3026880
See related
Ensembl:ENSMUSG00000043230 AllianceGenome:MGI:3026880
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A830043J08Rik
Summary
Predicted to be located in mitochondrion. Predicted to be active in nucleoplasm. Is expressed in several structures, including axial skeleton; heart; lung; nervous system; and sensory organ. Orthologous to human FAM124B (family with sequence similarity 124 member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 2.3), lung adult (RPKM 0.9) and 2 other tissues See more
Orthologs
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Genomic context

See Fam124b in Genome Data Viewer
Location:
1 C5; 1 41.19 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (80176416..80192050, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (80198699..80214205, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33970 Neighboring gene STARR-seq mESC enhancer starr_01453 Neighboring gene predicted gene, 23934 Neighboring gene STARR-seq mESC enhancer starr_01454 Neighboring gene RIKEN cDNA 2310015K22 gene Neighboring gene STARR-seq mESC enhancer starr_01455 Neighboring gene predicted gene, 57487 Neighboring gene STARR-seq mESC enhancer starr_01456 Neighboring gene predicted gene, 34098 Neighboring gene cullin 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173425.3NP_775601.1  protein FAM124B

    See identical proteins and their annotated locations for NP_775601.1

    Status: VALIDATED

    Source sequence(s)
    AK043867, AV276683
    Consensus CDS
    CCDS15093.1
    UniProtKB/Swiss-Prot
    Q8BLQ0
    UniProtKB/TrEMBL
    B9EKF5
    Related
    ENSMUSP00000052208.2, ENSMUST00000058748.2
    Conserved Domains (1) summary
    pfam15067
    Location:10244
    FAM124; FAM124 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    80176416..80192050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017320658.3XP_017176147.1  protein FAM124B isoform X1

    Conserved Domains (1) summary
    pfam15067
    Location:10244
    FAM124; FAM124 family