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Ppfia1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [ Mus musculus (house mouse) ]

Gene ID: 233977, updated on 5-Mar-2024

Summary

Official Symbol
Ppfia1provided by MGI
Official Full Name
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1provided by MGI
Primary source
MGI:MGI:1924750
See related
Ensembl:ENSMUSG00000037519 AllianceGenome:MGI:1924750
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
LIP1; LIP.1; C030014K08Rik
Summary
Acts upstream of or within negative regulation of stress fiber assembly. Predicted to be located in several cellular components, including axon; dendrite; and focal adhesion. Predicted to be part of protein-containing complex. Predicted to be active in presynaptic active zone. Is expressed in several structures, including blood vessel endothelium; central nervous system; genitourinary system; retina; and spleen. Orthologous to human PPFIA1 (PTPRF interacting protein alpha 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in cerebellum adult (RPKM 13.1), CNS E11.5 (RPKM 12.8) and 28 other tissues See more
Orthologs
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Try the new Transcript table

Genomic context

See Ppfia1 in Genome Data Viewer
Location:
7 F5; 7 88.85 cM
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (144030492..144107497, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (144476755..144553762, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34561 Neighboring gene cortactin Neighboring gene STARR-positive B cell enhancer ABC_E6619 Neighboring gene STARR-positive B cell enhancer ABC_E9306 Neighboring gene predicted gene, 35626 Neighboring gene Fas associated via death domain Neighboring gene anoctamin 1, calcium activated chloride channel Neighboring gene RIKEN cDNA D930030F02 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC189815, MGC189929

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in Schaffer collateral - CA1 synapse ISO
Inferred from Sequence Orthology
more info
 
located_in axon ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
located_in focal adhesion ISO
Inferred from Sequence Orthology
more info
 
is_active_in presynaptic active zone IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in spine apparatus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
liprin-alpha-1
Names
Liprin-alpha1
liprin

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033319.2NP_001028491.1  liprin-alpha-1 isoform B

    See identical proteins and their annotated locations for NP_001028491.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (B) lacks an in-frame exon in the 5' coding region, compared to variant A. The resulting protein (isoform B) is shorter than isoform A.
    Source sequence(s)
    AC140268, AC153792
    Consensus CDS
    CCDS52464.1
    UniProtKB/TrEMBL
    B2RXW8, B8QI33
    Related
    ENSMUSP00000126233.3, ENSMUST00000168134.10
    Conserved Domains (7) summary
    cd09562
    Location:884954
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10011066
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10861157
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    smart00454
    Location:10871157
    SAM; Sterile alpha motif
    COG1842
    Location:302515
    PspA; Phage shock protein A [Transcription, Signal transduction mechanisms]
    cl03951
    Location:406514
    CDC37_N; Cdc37 N terminal kinase binding
    cl12013
    Location:323444
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
  2. NM_001195086.1NP_001182015.1  liprin-alpha-1 isoform A

    See identical proteins and their annotated locations for NP_001182015.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (A) represents the longer transcript and encodes the longer isoform (A).
    Source sequence(s)
    AC140268, AC153792
    Consensus CDS
    CCDS59738.1
    UniProtKB/TrEMBL
    B2RXQ2, B8QI33
    Related
    ENSMUSP00000138312.2, ENSMUST00000182226.8
    Conserved Domains (7) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10261091
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11111182
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    smart00454
    Location:11121182
    SAM; Sterile alpha motif
    COG1842
    Location:302540
    PspA; Phage shock protein A [Transcription, Signal transduction mechanisms]
    pfam00836
    Location:406523
    Stathmin; Stathmin family
    cl12013
    Location:323469
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    144030492..144107497 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006508610.4XP_006508673.1  liprin-alpha-1 isoform X22

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:874944
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9611026
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10461117
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:171516
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:412663
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  2. XM_017322222.3XP_017177711.1  liprin-alpha-1 isoform X16

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:874944
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9911056
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10761147
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:171516
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:412663
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  3. XM_036153023.1XP_036008916.1  liprin-alpha-1 isoform X10

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:874944
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10121077
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10971168
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:171516
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:389660
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  4. XM_011241995.4XP_011240297.1  liprin-alpha-1 isoform X6

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:884954
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10221087
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11071178
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:171516
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:412663
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  5. XM_006508609.5XP_006508672.1  liprin-alpha-1 isoform X19

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:899969
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9861051
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10711142
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  6. XM_017322223.3XP_017177712.1  liprin-alpha-1 isoform X18

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:899969
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9871052
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10721143
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  7. XM_017322220.3XP_017177709.1  liprin-alpha-1 isoform X8

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:899969
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10161081
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11011172
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  8. XM_011241991.4XP_011240293.1  liprin-alpha-1 isoform X2

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:899969
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10371102
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11221193
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  9. XM_036153025.1XP_036008918.1  liprin-alpha-1 isoform X20

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (6) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9961061
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10811152
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:421685
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  10. XM_006508608.5XP_006508671.1  liprin-alpha-1 isoform X15

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9961061
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10811152
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  11. XM_006508607.5XP_006508670.1  liprin-alpha-1 isoform X14

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9971062
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10821153
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  12. XM_006508605.5XP_006508668.1  liprin-alpha-1 isoform X13

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10051070
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10901161
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  13. XM_006508603.5XP_006508666.1  liprin-alpha-1 isoform X11

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10061071
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10911162
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  14. XM_006508599.5XP_006508662.1  liprin-alpha-1 isoform X5

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10261091
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11111182
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  15. XM_006508604.5XP_006508667.1  liprin-alpha-1 isoform X12

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10171082
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11021173
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  16. XM_006508601.5XP_006508664.1  liprin-alpha-1 isoform X7

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10171082
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11021173
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  17. XM_017322221.3XP_017177710.1  liprin-alpha-1 isoform X9

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10271092
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11121183
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  18. XM_006508598.5XP_006508661.1  liprin-alpha-1 isoform X4

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10271092
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11121183
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  19. XM_011241992.4XP_011240294.1  liprin-alpha-1 isoform X3

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10471112
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11321203
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  20. XM_030242539.2XP_030098399.1  liprin-alpha-1 isoform X23

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:874944
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9621027
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10471118
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:171516
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:412663
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  21. XM_006508612.4XP_006508675.1  liprin-alpha-1 isoform X26

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:884954
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9921057
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10771148
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:171516
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:412663
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  22. XM_011241996.4XP_011240298.1  liprin-alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_011240298.1

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10471112
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11321203
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  23. XM_011241997.2XP_011240299.1  liprin-alpha-1 isoform X25

    Conserved Domains (3) summary
    cd09562
    Location:256326
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:394459
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:479550
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
  24. XM_006508611.4XP_006508674.1  liprin-alpha-1 isoform X24

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:874944
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9611026
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10461117
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:171516
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:412663
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  25. XM_017322224.3XP_017177713.1  liprin-alpha-1 isoform X21

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (5) summary
    cd09562
    Location:899969
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:9861051
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:10711142
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  26. XM_036153024.1XP_036008917.1  liprin-alpha-1 isoform X17

    UniProtKB/TrEMBL
    B8QI33
    Conserved Domains (6) summary
    cd09562
    Location:909979
    SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
    cd09565
    Location:10471112
    SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
    cd09568
    Location:11321203
    SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
    COG1196
    Location:45418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:246545
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:421685
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type