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TSPYL4 TSPY like 4 [ Homo sapiens (human) ]

Gene ID: 23270, updated on 13-May-2022

Summary

Official Symbol
TSPYL4provided by HGNC
Official Full Name
TSPY like 4provided by HGNC
Primary source
HGNC:HGNC:21559
See related
Ensembl:ENSG00000187189 MIM:619586; AllianceGenome:HGNC:21559
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
dJ486I3.2
Summary
Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in nucleosome assembly. Predicted to be active in chromatin and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See TSPYL4 in Genome Data Viewer
Location:
6q22.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (116249964..116254075, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (117433945..117438056, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (116571127..116575238, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 2872 Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene collagen type X alpha 1 chain Neighboring gene NIP7 pseudogene 3 Neighboring gene ribosomal protein S5 pseudogene Neighboring gene RPS5 pseudogene 1 Neighboring gene dermatan sulfate epimerase Neighboring gene TSPY like 1

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA0721

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in chromatin IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
testis-specific Y-encoded-like protein 4
Names
TSPY-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021648.5NP_067680.3  testis-specific Y-encoded-like protein 4

    See identical proteins and their annotated locations for NP_067680.3

    Status: VALIDATED

    Source sequence(s)
    AB018264, AL134793, BC040453
    Consensus CDS
    CCDS5106.1
    UniProtKB/Swiss-Prot
    Q9UJ04
    Related
    ENSP00000410943.1, ENST00000420283.3
    Conserved Domains (1) summary
    pfam00956
    Location:207386
    NAP; Nucleosome assembly protein (NAP)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    116249964..116254075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    117433945..117438056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)