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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_007946.1 RefSeqGene
- Range
-
5001..98546
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_268
mRNA and Protein(s)
-
NM_001351527.2 → NP_001338456.1 probable helicase senataxin isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AA609547, AB014525, AI123313, AL353701, AY362728, BX538166, DA794966, DA989674
- Consensus CDS
-
CCDS6947.1
- Conserved Domains (3) summary
-
- pfam12726
Location:37 → 351
- SEN1_N; SEN1 N terminal
- pfam13086
Location:1933 → 2218
- AAA_11; AAA domain
- pfam13087
Location:2225 → 2424
- AAA_12; AAA domain
-
NM_001351528.2 → NP_001338457.1 probable helicase senataxin isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (2) has the same N- and C-terimini, but is longer than isoform 1.
- Source sequence(s)
-
AA609547, AB014525, AI123313, AK302394, AY362728, BX538166, DA989674
- Conserved Domains (3) summary
-
- pfam12726
Location:37 → 351
- SEN1_N; SEN1 N terminal
- pfam13086
Location:1933 → 2218
- AAA_11; AAA domain
- pfam13087
Location:2225 → 2424
- AAA_12; AAA domain
-
NM_015046.7 → NP_055861.3 probable helicase senataxin isoform 1
See identical proteins and their annotated locations for NP_055861.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the shortest transcript and encodes the shorter isoform (1). Variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AA609547, AB014525, AI123313, AY362728, BX538166, DA989674
- Consensus CDS
-
CCDS6947.1
- UniProtKB/Swiss-Prot
-
Q7Z333
- Related
- ENSP00000224140.5, ENST00000224140.6
- Conserved Domains (3) summary
-
- pfam12726
Location:37 → 351
- SEN1_N; SEN1 N terminal
- pfam13086
Location:1933 → 2218
- AAA_11; AAA domain
- pfam13087
Location:2225 → 2424
- AAA_12; AAA domain