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LINC02685 long intergenic non-protein coding RNA 2685 [ Homo sapiens (human) ]

Gene ID: 221122, updated on 13-May-2022

Summary

Official Symbol
LINC02685provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2685provided by HGNC
Primary source
HGNC:HGNC:27350
See related
Ensembl:ENSG00000254654 AllianceGenome:HGNC:27350
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02685 in Genome Data Viewer
Location:
11p11.2
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (44973902..44978028)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (45130901..45135027)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (44995453..44999579)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene tetraspanin 18 Neighboring gene uncharacterized LOC124902664 Neighboring gene tumor protein p53 inducible protein 11 Neighboring gene uncharacterized LOC105376649 Neighboring gene uncharacterized LOC105376650 Neighboring gene uncharacterized LOC105376652 Neighboring gene Sharpr-MPRA regulatory region 15340 Neighboring gene PR/SET domain 11

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026681.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC068858, BC039666
    Related
    ENST00000525114.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    44973902..44978028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    45130901..45135027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)