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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001127259.1 → NP_001120731.1 tumor protein 63 isoform a
See identical proteins and their annotated locations for NP_001120731.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a, also known as TAp63alpha).
- Source sequence(s)
-
AF075436, AK138305, BC090649
- Consensus CDS
-
CCDS49809.1
- UniProtKB/Swiss-Prot
- O88897, O88898, O88899, O89097, Q8C826, Q9QWY9, Q9QWZ0
- UniProtKB/TrEMBL
-
Q5CZX0
- Related
- ENSMUSP00000110965.3, ENSMUST00000115310.9
- Conserved Domains (4) summary
-
- cd09572
Location:543 → 607
- SAM_tumor-p63; SAM domain of tumor-p63 proteins
- pfam00870
Location:163 → 358
- P53; P53 DNA-binding domain
- pfam07710
Location:392 → 431
- P53_tetramer; P53 tetramerisation motif
- pfam08430
Location:452 → 535
- Forkhead_N; Forkhead N-terminal region
-
NM_001127260.1 → NP_001120732.1 tumor protein 63 isoform b
See identical proteins and their annotated locations for NP_001120732.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks a coding exon in the 3' region, as compared to variant 1. The resulting isoform (b, also known as TAp63beta) has a shorter and different C-terminus, as compared to isoform a.
- Source sequence(s)
-
AF075435, AK138305, BC090649
- Consensus CDS
-
CCDS49810.1
- UniProtKB/Swiss-Prot
-
O88898
- UniProtKB/TrEMBL
-
Q5CZX0
- Related
- ENSMUSP00000067005.6, ENSMUST00000065523.12
- Conserved Domains (2) summary
-
- cd08367
Location:177 → 358
- P53; P53 DNA-binding domain
- pfam07710
Location:392 → 428
- P53_tetramer; P53 tetramerisation motif
-
NM_001127261.1 → NP_001120733.1 tumor protein 63 isoform c
See identical proteins and their annotated locations for NP_001120733.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal 12 nt segment and several 3' exons but has an alternate 3' exon, as compared to variant 1. The resulting isoform (c, also known as TAp63gamma) lacks internal 4 aa and has a shorter and different C-terminus, as compared to isoform a.
- Source sequence(s)
-
AF075434, AK138305, AK140023, BC092537
- Consensus CDS
-
CCDS49808.1
- UniProtKB/Swiss-Prot
-
O88898
- UniProtKB/TrEMBL
-
Q569E5
- Related
- ENSMUSP00000110963.3, ENSMUST00000115308.9
- Conserved Domains (2) summary
-
- cd08367
Location:177 → 358
- P53; P53 DNA-binding domain
- pfam07710
Location:388 → 424
- P53_tetramer; P53 tetramerisation motif
-
NM_001127262.1 → NP_001120734.1 tumor protein 63 isoform f
See identical proteins and their annotated locations for NP_001120734.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) is an alternate promoter product; it lacks several 5' exons and an internal exon in the 3' region, but has an alternate 5' exon, as compared to variant 1. The resulting isoform (f, also known as DNp63beta) has shorter and different N- and C-termini, as compared to isoform a.
- Source sequence(s)
-
AF075438, AK048623, BC090649
- UniProtKB/Swiss-Prot
-
O88898
- UniProtKB/TrEMBL
-
Q5CZX0
- Conserved Domains (2) summary
-
- cd08367
Location:83 → 264
- P53; P53 DNA-binding domain
- pfam07710
Location:298 → 334
- P53_tetramer; P53 tetramerisation motif
-
NM_001127263.1 → NP_001120735.1 tumor protein 63 isoform g
See identical proteins and their annotated locations for NP_001120735.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) is an alternate promoter product; it lacks several 5' and 3' exons, but has alternate 5' and 3' exons, as compared to variant 1. The resulting isoform (g, also known as DNp63gamma) has shorter and different N- and C-termini, as compared to isoform a.
- Source sequence(s)
-
AK140023, BC092537
- Consensus CDS
-
CCDS49812.1
- UniProtKB/TrEMBL
-
Q569E5
- Related
- ENSMUSP00000110960.2, ENSMUST00000115305.2
- Conserved Domains (2) summary
-
- cd08367
Location:83 → 264
- P53; P53 DNA-binding domain
- pfam07710
Location:298 → 334
- P53_tetramer; P53 tetramerisation motif
-
NM_001127264.1 → NP_001120736.1 tumor protein 63 isoform e
See identical proteins and their annotated locations for NP_001120736.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) is an alternate promoter product; it lacks several 5' exons and an internal 12 nt segment, but has an alternate 5' exon, as compared to variant 1. The resulting isoform (e) has a shorter and different N-terminus, and lacks internal 4 aa, as compared to isoform a.
- Source sequence(s)
-
AK048623, AK137253, BC090649
- Consensus CDS
-
CCDS49811.1
- UniProtKB/TrEMBL
- Q3UVI3, Q5CZX0
- Related
- ENSMUSP00000110961.2, ENSMUST00000115306.8
- Conserved Domains (3) summary
-
- cd08367
Location:83 → 264
- P53; P53 DNA-binding domain
- cd09572
Location:445 → 509
- SAM_tumor-p63; SAM domain of tumor-p63 proteins
- pfam07710
Location:294 → 330
- P53_tetramer; P53 tetramerisation motif
-
NM_001127265.1 → NP_001120737.1 tumor protein 63 isoform h
See identical proteins and their annotated locations for NP_001120737.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) is an alternate promoter product; it lacks several 5' and 3' exons and an internal 12 nt segment, but has alternate 5' and 3' exons, as compared to variant 1. The resulting isoform (h, also known as DNp63gamma) has shorter and different N- and C-termini, and lacks internal 4 aa, as compared to isoform a.
- Source sequence(s)
-
AF075437, AK048623, AK140023, BC092537
- UniProtKB/Swiss-Prot
-
O88898
- UniProtKB/TrEMBL
-
Q569E5
- Conserved Domains (2) summary
-
- cd08367
Location:83 → 264
- P53; P53 DNA-binding domain
- pfam07710
Location:294 → 330
- P53_tetramer; P53 tetramerisation motif
-
NM_001427037.1 → NP_001413966.1 tumor protein 63 isoform i
Status: REVIEWED
- Source sequence(s)
-
AC109213, AC113020
- UniProtKB/TrEMBL
-
Q5CZX0
-
NM_011641.2 → NP_035771.1 tumor protein 63 isoform d
See identical proteins and their annotated locations for NP_035771.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) is an alternate promoter product; it lacks several 5' exons but has an alternate 5' exon, as compared to variant 1. The resulting isoform (d, also known as DNp63alpha) has a shorter and different N-terminus, as compared to isoform a.
- Source sequence(s)
-
AF075439, AK048623, BC090649
- Consensus CDS
-
CCDS28085.1
- UniProtKB/TrEMBL
-
Q5CZX0
- Related
- ENSMUSP00000038117.7, ENSMUST00000040231.13
- Conserved Domains (3) summary
-
- cd08367
Location:83 → 264
- P53; P53 DNA-binding domain
- cd09572
Location:449 → 513
- SAM_tumor-p63; SAM domain of tumor-p63 proteins
- pfam07710
Location:298 → 334
- P53_tetramer; P53 tetramerisation motif
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
25502513..25710842
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006522002.1 → XP_006522065.1 tumor protein 63 isoform X3
- Conserved Domains (2) summary
-
- cd08367
Location:177 → 358
- P53; P53 DNA-binding domain
- pfam07710
Location:392 → 428
- P53_tetramer; P53 tetramerisation motif
-
XM_006522001.3 → XP_006522064.1 tumor protein 63 isoform X2
- UniProtKB/TrEMBL
-
Q5CZX0
- Conserved Domains (4) summary
-
- cd08367
Location:58 → 239
- P53; P53 DNA-binding domain
- cd09572
Location:424 → 488
- SAM_tumor-p63; SAM domain of tumor-p63 proteins
- pfam07710
Location:273 → 309
- P53_tetramer; P53 tetramerisation motif
- pfam08430
Location:338 → 415
- Forkhead_N; Forkhead N-terminal region