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CCDC89 coiled-coil domain containing 89 [ Homo sapiens (human) ]

Gene ID: 220388, updated on 13-May-2022

Summary

Official Symbol
CCDC89provided by HGNC
Official Full Name
coiled-coil domain containing 89provided by HGNC
Primary source
HGNC:HGNC:26762
See related
Ensembl:ENSG00000179071 AllianceGenome:HGNC:26762
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See CCDC89 in Genome Data Viewer
Location:
11q14.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (85683848..85686195, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (85620532..85622879, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (85394891..85397238, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene transmembrane protein 126A Neighboring gene CREB/ATF bZIP transcription factor Neighboring gene synaptotagmin like 2 Neighboring gene coiled-coil domain containing 83 Neighboring gene adenosylhomocysteinase pseudogene 6

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ38159

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 89
Names
bc8 orange-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_152723.3NP_689936.1  coiled-coil domain-containing protein 89

    See identical proteins and their annotated locations for NP_689936.1

    Status: VALIDATED

    Source sequence(s)
    AK095478, BI559499, DB509087
    Consensus CDS
    CCDS8270.1
    UniProtKB/Swiss-Prot
    Q8N998
    Related
    ENSP00000320649.3, ENST00000316398.5
    Conserved Domains (1) summary
    cl25732
    Location:21344
    SMC_N; RecF/RecN/SMC N terminal domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    85683848..85686195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    85620532..85622879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)