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Arl15 ADP-ribosylation factor-like 15 [ Mus musculus (house mouse) ]

Gene ID: 218639, updated on 26-Sep-2022

Summary

Official Symbol
Arl15provided by MGI
Official Full Name
ADP-ribosylation factor-like 15provided by MGI
Primary source
MGI:MGI:2442308
See related
Ensembl:ENSMUSG00000042348 AllianceGenome:MGI:2442308
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Arfrp2; A430036I03; C230032K13Rik
Summary
Predicted to enable GTP binding activity. Is expressed in genitourinary system; gut gland; heart; nervous system; and stomach. Orthologous to human ARL15 (ADP ribosylation factor like GTPase 15). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E14 (RPKM 3.6), CNS E18 (RPKM 3.3) and 28 other tissues See more
Orthologs
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Genomic context

See Arl15 in Genome Data Viewer
Location:
13; 13 D2.2
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (113929963..114293998)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (113794506..114157462)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 31276 Neighboring gene GC-rich promoter binding protein 1-like 1 pseudogene Neighboring gene RIKEN cDNA A430090L17 gene Neighboring gene predicted gene, 41072 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3) 
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables molecular_function ND
No biological Data available
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 

General protein information

Preferred Names
ADP-ribosylation factor-like protein 15
Names
ADP-ribosylation factor related protein 2
ARF-related protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172595.5NP_766183.1  ADP-ribosylation factor-like protein 15

    See identical proteins and their annotated locations for NP_766183.1

    Status: VALIDATED

    Source sequence(s)
    AC126939, AC154862
    Consensus CDS
    CCDS36785.1
    UniProtKB/Swiss-Prot
    Q8BGR6
    Related
    ENSMUSP00000088740.7, ENSMUST00000091201.7
    Conserved Domains (2) summary
    COG1100
    Location:31197
    Gem1; GTPase SAR1 family domain [General function prediction only]
    cl21455
    Location:34193
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    113929963..114293998
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006517630.4XP_006517693.1  ADP-ribosylation factor-like protein 15 isoform X4

    See identical proteins and their annotated locations for XP_006517693.1

    UniProtKB/TrEMBL
    B7ZN40
    Related
    ENSMUSP00000153127.2, ENSMUST00000224068.2
    Conserved Domains (1) summary
    cl38936
    Location:34173
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  2. XM_006517629.5XP_006517692.1  ADP-ribosylation factor-like protein 15 isoform X3

    Conserved Domains (1) summary
    cl38936
    Location:34165
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  3. XM_030247239.2XP_030103099.1  ADP-ribosylation factor-like protein 15 isoform X1

    Conserved Domains (1) summary
    cl38936
    Location:34193
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  4. XM_011244655.4XP_011242957.1  ADP-ribosylation factor-like protein 15 isoform X2

    Conserved Domains (1) summary
    cl38936
    Location:26185
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases