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Aldh1l2 aldehyde dehydrogenase 1 family, member L2 [ Mus musculus (house mouse) ]

Gene ID: 216188, updated on 5-Feb-2023

Summary

Official Symbol
Aldh1l2provided by MGI
Official Full Name
aldehyde dehydrogenase 1 family, member L2provided by MGI
Primary source
MGI:MGI:2444680
See related
Ensembl:ENSMUSG00000020256 AllianceGenome:MGI:2444680
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mtFDH; D330038I09Rik
Summary
Predicted to enable aldehyde dehydrogenase (NAD+) activity and formyltetrahydrofolate dehydrogenase activity. Predicted to be involved in 10-formyltetrahydrofolate catabolic process; biosynthetic process; and one-carbon metabolic process. Located in mitochondrion. Used to study non-alcoholic fatty liver disease. Orthologous to human ALDH1L2 (aldehyde dehydrogenase 1 family member L2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in CNS E18 (RPKM 8.3), whole brain E14.5 (RPKM 6.4) and 13 other tissues See more
Orthologs
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Genomic context

See Aldh1l2 in Genome Data Viewer
Location:
10; 10 C1
Exon count:
24
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (83320386..83370008, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (83487447..83534146, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene NOP protein chaperone 1 Neighboring gene destrin pseudogene Neighboring gene WASH complex subunit 4 Neighboring gene adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC19039

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
mitochondrial 10-formyltetrahydrofolate dehydrogenase
Names
aldehyde dehydrogenase 1L2
aldehyde dehydrogenase family 1 member L2, mitochondrial
mitochondrial 10-FTHFDH
probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2
NP_705771.2
XP_011241705.2
XP_036011636.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153543.2NP_705771.2  mitochondrial 10-formyltetrahydrofolate dehydrogenase

    See identical proteins and their annotated locations for NP_705771.2

    Status: VALIDATED

    Source sequence(s)
    AC113014, AK141954, CJ130150
    Consensus CDS
    CCDS24077.1
    UniProtKB/Swiss-Prot
    E9QLV8, Q8K009
    Related
    ENSMUSP00000020497.8, ENSMUST00000020497.14
    Conserved Domains (5) summary
    cd07140
    Location:438923
    ALDH_F1L_FTFDH; 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L
    cd08647
    Location:23225
    FMT_core_FDH_N; 10-formyltetrahydrofolate dehydrogenase (FDH), N-terminal hydrolase domain
    cd08703
    Location:228327
    FDH_Hydrolase_C; The C-terminal subdomain of the hydrolase domain on the bi-functional protein 10-formyltetrahydrofolate dehydrogenase
    COG0223
    Location:22326
    Fmt; Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]
    pfam00550
    Location:346410
    PP-binding; Phosphopantetheine attachment site

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    83320386..83370008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011243403.4XP_011241705.2  mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X1

    Conserved Domains (4) summary
    cd07140
    Location:307792
    ALDH_F1L_FTFDH; 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L
    cd08703
    Location:97196
    FDH_Hydrolase_C; The C-terminal subdomain of the hydrolase domain on the bi-functional protein 10-formyltetrahydrofolate dehydrogenase
    pfam00550
    Location:215279
    PP-binding; Phosphopantetheine attachment site
    cl00395
    Location:2994
    FMT_core; Formyltransferase, catalytic core domain
  2. XM_036155743.1XP_036011636.1  mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X2