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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001161722.1 → NP_001155194.1 transcription factor EB isoform b
See identical proteins and their annotated locations for NP_001155194.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode isoform b.
- Source sequence(s)
-
AC113536, AC124830, AK078755, BC064789
- Consensus CDS
-
CCDS50133.1
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
- Q6P203, Q8C5F1
- Related
- ENSMUSP00000084151.4, ENSMUST00000086932.10
- Conserved Domains (3) summary
-
- pfam11851
Location:320 → 472
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:4 → 161
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:225 → 315
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins
-
NM_001161723.1 → NP_001155195.1 transcription factor EB isoform b
See identical proteins and their annotated locations for NP_001155195.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode isoform b.
- Source sequence(s)
-
AC113536, AC124830, AK078755, BC064789
- Consensus CDS
-
CCDS50133.1
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
- Q6P203, Q8C5F1
- Related
- ENSMUSP00000108913.2, ENSMUST00000113288.8
- Conserved Domains (3) summary
-
- pfam11851
Location:320 → 472
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:4 → 161
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:225 → 315
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins
-
NM_011549.3 → NP_035679.3 transcription factor EB isoform a
See identical proteins and their annotated locations for NP_035679.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AC113536, AK146016, BC064789
- Consensus CDS
-
CCDS28856.1
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
- Q3UKG7, Q6P203
- Related
- ENSMUSP00000024786.8, ENSMUST00000024786.14
- Conserved Domains (3) summary
-
- cd00083
Location:291 → 351
- HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
- pfam11851
Location:379 → 531
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:63 → 219
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus