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HETIRDRAFT_39750 carbohydrate esterase family 9 protein [ Heterobasidion irregulare TC 32-1 ]

Gene ID: 20672499, updated on 3-Jan-2024

Summary

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Gene symbol
HETIRDRAFT_39750
Gene description
carbohydrate esterase family 9 protein
Locus tag
HETIRDRAFT_39750
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Heterobasidion irregulare TC 32-1 (strain: TC 32-1, nat-host: Pinus resinosa)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Russulales; Bondarzewiaceae; Heterobasidion; Heterobasidion annosum species complex
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Genomic context

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Location:
chromosome: Unknown
Exon count:
9

NW_009258210.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene cytochrome P450 monooxygenase 65 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258210.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. Olson Å, et al. New Phytol, 2012 Jun. PMID 22463738

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-phosphate deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate esterase family 9 protein
XP_009553039.1
  • candidate esterase related to N-acetylglucosamine-6-phosphate deacetylases

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_009258210.1 Reference assembly

    Range
    670348..672591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009554744.1 → XP_009553039.1  carbohydrate esterase family 9 protein [Heterobasidion irregulare TC 32-1]

    See identical proteins and their annotated locations for XP_009553039.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W4JN11
    Conserved Domains (1) summary
    cl00281
    Location:8 → 429
    metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...
Nucleotide Protein
Heading Accession and Version

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