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HETIRDRAFT_306992 uncharacterized protein [ Heterobasidion irregulare TC 32-1 ]

Gene ID: 20669450, updated on 3-Jan-2024

Summary

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Gene symbol
HETIRDRAFT_306992
Gene description
uncharacterized protein
Locus tag
HETIRDRAFT_306992
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Heterobasidion irregulare TC 32-1 (strain: TC 32-1, nat-host: Pinus resinosa)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Russulales; Bondarzewiaceae; Heterobasidion; Heterobasidion annosum species complex
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Genomic context

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See HETIRDRAFT_306992 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_009258197.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mfs acetyl-CoA transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258197.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. Olson Å, et al. New Phytol, 2012 Jun. PMID 22463738

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dihydroorotate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_009258197.1 Reference assembly

    Range
    3038079..3039207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009543214.1 → XP_009541509.1  uncharacterized protein HETIRDRAFT_306992 [Heterobasidion irregulare TC 32-1]

    See identical proteins and their annotated locations for XP_009541509.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W4KP93
    Conserved Domains (1) summary
    cl21457
    Location:2 → 347
    TIM_phosphate_binding; TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate ...
Nucleotide Protein
Heading Accession and Version

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