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T265_15006 hypothetical protein [ Opisthorchis viverrini ]

Gene ID: 20329172, updated on 28-Dec-2023

Summary

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Gene symbol
T265_15006
Gene description
hypothetical protein
Locus tag
T265_15006
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Opisthorchis viverrini
Lineage
Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Opisthorchis
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Genomic context

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Location:
chromosome: Unknown
Exon count:
12

NW_008751976.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008751976.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Opisthorchis viverrini genome provides insights into life in the bile duct. Young ND, et al. Nat Commun, 2014 Jul 9. PMID 25007141, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inward rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane repolarization during action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008751976.1 Reference assembly

    Range
    443521..482451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009176168.1 → XP_009174432.1  hypothetical protein T265_15006, partial [Opisthorchis viverrini]

    See identical proteins and their annotated locations for XP_009174432.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A075A350
    Conserved Domains (5) summary
    cd00038
    Location:736 → 892
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cd00130
    Location:41 → 131
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam00520
    Location:444 → 662
    Ion_trans; Ion transport protein
    pfam07885
    Location:605 → 659
    Ion_trans_2; Ion channel
    pfam13426
    Location:35 → 130
    PAS_9; PAS domain
Nucleotide Protein
Heading Accession and Version

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