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TMEM184A transmembrane protein 184A [ Homo sapiens (human) ]

Gene ID: 202915, updated on 17-Jun-2019

Summary

Official Symbol
TMEM184Aprovided by HGNC
Official Full Name
transmembrane protein 184Aprovided by HGNC
Primary source
HGNC:HGNC:28797
See related
Ensembl:ENSG00000164855
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SDMG1
Expression
Ubiquitous expression in small intestine (RPKM 9.8), duodenum (RPKM 8.8) and 25 other tissues See more
Orthologs

Genomic context

See TMEM184A in Genome Data Viewer
Location:
7p22.3
Exon count:
11
Annotation release Status Assembly Chr Location
109.20190607 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (1542235..1560821, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (1581871..1596066, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene INTS1-MAFK intergenic CAGE-defined mid-level expression enhancer Neighboring gene uncharacterized LOC100128653 Neighboring gene Sharpr-MPRA regulatory region 13805 Neighboring gene MAF bZIP transcription factor K Neighboring gene PSMG3 antisense RNA 1 (head to head) Neighboring gene proteasome assembly chaperone 3 Neighboring gene uncharacterized LOC105375122

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC9712, FLJ24011

Gene Ontology Provided by GOA

Function Evidence Code Pubs
heparin binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
cytoplasmic vesicle membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
early endosome membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
early endosome membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
endosome ISS
Inferred from Sequence or Structural Similarity
more info
 
integral component of membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
perinuclear region of cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
secretory granule membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
transmembrane protein 184A
Names
sexually dimorphic, expressed in male gonads 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097620.2NP_001091089.1  transmembrane protein 184A

    See identical proteins and their annotated locations for NP_001091089.1

    Status: VALIDATED

    Source sequence(s)
    AC093734, AK172850, BM981655
    Consensus CDS
    CCDS43537.1
    UniProtKB/Swiss-Prot
    Q6ZMB5
    Related
    ENSP00000297477.4, ENST00000297477.10
    Conserved Domains (1) summary
    pfam03619
    Location:55325
    Solute_trans_a; Organic solute transporter Ostalpha

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    1542235..1560821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017011815.2XP_016867304.1  transmembrane protein 184A isoform X1

  2. XM_006715655.2XP_006715718.1  transmembrane protein 184A isoform X5

    See identical proteins and their annotated locations for XP_006715718.1

    Conserved Domains (1) summary
    pfam03619
    Location:194304
    Solute_trans_a; Organic solute transporter Ostalpha
  3. XM_011515164.1XP_011513466.1  transmembrane protein 184A isoform X3

    Conserved Domains (1) summary
    pfam03619
    Location:55197
    Solute_trans_a; Organic solute transporter Ostalpha
  4. XM_006715653.1XP_006715716.1  transmembrane protein 184A isoform X2

    Conserved Domains (1) summary
    pfam03619
    Location:55217
    Solute_trans_a; Organic solute transporter Ostalpha
  5. XM_011515165.2XP_011513467.1  transmembrane protein 184A isoform X4

    Conserved Domains (1) summary
    pfam03619
    Location:55217
    Solute_trans_a; Organic solute transporter Ostalpha
  6. XM_011515166.2XP_011513468.1  transmembrane protein 184A isoform X6

    Related
    ENSP00000325945.5, ENST00000319010.9
    Conserved Domains (1) summary
    pfam03619
    Location:55214
    Solute_trans_a; Organic solute transporter Ostalpha

RNA

  1. XR_001744577.2 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_152689.2: Suppressed sequence

    Description
    NM_152689.2: This RefSeq was permanently suppressed because it contains the wrong CDS.
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