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PPTG_05561 hypothetical protein [ Phytophthora parasitica INRA-310 ]

Gene ID: 20175599, updated on 28-Dec-2023

Summary

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Gene symbol
PPTG_05561
Gene description
hypothetical protein
Locus tag
PPTG_05561
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Phytophthora parasitica INRA-310 (strain: INRA-310)
Lineage
Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora
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Genomic context

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Location:
chromosome: Unknown
Exon count:
1

NW_008648993.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008648993.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAMP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008648993.1 Reference assembly

    Range
    1656214..1658751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008899146.1 → XP_008897394.1  hypothetical protein PPTG_05561 [Phytophthora parasitica INRA-310]

    See identical proteins and their annotated locations for XP_008897394.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W2QZL8, W2YCJ4
    Conserved Domains (2) summary
    cd05402
    Location:177 → 284
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:522 → 579
    PAP_assoc; Cid1 family poly A polymerase
Nucleotide Protein
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Molecular Biology Databases