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UCRPA7_8694 putative histone deacetylase rpd3 protein [ Phaeoacremonium minimum UCRPA7 ]

Gene ID: 19329570, updated on 25-Jan-2024

Summary

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Gene symbol
UCRPA7_8694
Gene description
putative histone deacetylase rpd3 protein
Locus tag
UCRPA7_8694
Gene type
protein coding
RNA name
putative histone deacetylase rpd3 protein
RefSeq status
PROVISIONAL
Organism
Phaeoacremonium minimum UCRPA7 (strain: UCRPA7, nat-host: Vitis vinifera cv. Thompson)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Togniniales; Togniniaceae; Phaeoacremonium
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Genomic context

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Location:
chromosome: Unknown
Exon count:
4

NW_006921506.1Genomic Context describing neighboring genes Neighboring gene putative fad dependent oxidoreductase protein Neighboring gene putative polyketide synthase protein Neighboring gene putative 26s proteasome regulatory subunit protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921506.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Ascomycete Phaeoacremonium aleophilum Strain UCR-PA7, a Causal Agent of the Esca Disease Complex in Grapevines. Blanco-Ulate B, et al. Genome Announc, 2013 Jun 27. PMID 23814032, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative histone deacetylase rpd3 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006921506.1 Reference assembly

    Range
    333864..335973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007921205.1 → XP_007919396.1  putative histone deacetylase rpd3 protein [Phaeoacremonium minimum UCRPA7]

    See identical proteins and their annotated locations for XP_007919396.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R8B949
    Conserved Domains (3) summary
    PTZ00063
    Location:20 → 419
    PTZ00063; histone deacetylase; Provisional
    pfam05466
    Location:493 → 629
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
    cl17011
    Location:21 → 395
    Arginase_HDAC; Arginase-like and histone-like hydrolases
Nucleotide Protein
Heading Accession and Version

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