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PFL1_06396 uncharacterized protein [ Pseudozyma flocculosa PF-1 ]

Gene ID: 19320474, updated on 30-Nov-2023

Summary

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Gene symbol
PFL1_06396
Gene description
uncharacterized protein
Locus tag
PFL1_06396
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudozyma flocculosa PF-1 (strain: PF-1)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_006920894.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006920894.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transition from a phytopathogenic smut ancestor to an anamorphic biocontrol agent deciphered by comparative whole-genome analysis. Lefebvre F, et al. Plant Cell, 2013 Jun. PMID 23800965, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phenylalanine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phenylalanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_007882130.1
  • putative phenylalanyl-trna synthetase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006920894.1 Reference assembly

    Range
    16720..18465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007883939.1 → XP_007882130.1  uncharacterized protein PFL1_06396 [Pseudozyma flocculosa PF-1]

    See identical proteins and their annotated locations for XP_007882130.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A061H5S9, A0A5C3ETT8
    Conserved Domains (3) summary
    smart00896
    Location:395 → 505
    FDX-ACB; Ferredoxin-fold anticodon binding domain
    PLN02788
    Location:15 → 505
    PLN02788; phenylalanine-tRNA synthetase
    cl00268
    Location:52 → 334
    class_II_aaRS-like_core; Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases