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COCSADRAFT_176618 hypothetical protein [ Bipolaris sorokiniana ND90Pr ]

Gene ID: 19133045, updated on 14-Dec-2023

Summary

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Gene symbol
COCSADRAFT_176618
Gene description
hypothetical protein
Locus tag
COCSADRAFT_176618
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Bipolaris sorokiniana ND90Pr (strain: ND90Pr)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Bipolaris
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_006911914.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006911914.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi. Ohm RA, et al. PLoS Pathog, 2012. PMID 23236275, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006911914.1 Reference assembly

    Range
    204085..205387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007707693.1 → XP_007705883.1  uncharacterized protein COCSADRAFT_176618 [Bipolaris sorokiniana ND90Pr]

    See identical proteins and their annotated locations for XP_007705883.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8H6DYA2, M2S7S3
    Conserved Domains (3) summary
    PHA03418
    Location:178 → 363
    PHA03418; hypothetical E4 protein; Provisional
    COG5078
    Location:1 → 154
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cl00154
    Location:22 → 148
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
Protein Accession Links
GenPept Link UniProtKB Link
EMD58430.1

Gene LinkOut

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Molecular Biology Databases