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STEHIDRAFT_146557 glutamine-tRNA ligase [ Stereum hirsutum FP-91666 SS1 ]

Gene ID: 18799560, updated on 2-Jan-2024

Summary

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Gene symbol
STEHIDRAFT_146557
Gene description
glutamine-tRNA ligase
Locus tag
STEHIDRAFT_146557
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Stereum hirsutum FP-91666 SS1 (strain: FP-91666 SS1)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Russulales; Stereaceae; Stereum
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Genomic context

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See STEHIDRAFT_146557 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_006763135.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene high nitrogen upregulated cytochrome P450 monooxygenase 2 Neighboring gene SET domain protein Neighboring gene secreted arabinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006763135.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Floudas D, et al. Science, 2012 Jun 29. PMID 22745431

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutaminyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamine-tRNA ligase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006763135.1 Reference assembly

    Range
    2588317..2591395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007303085.1 → XP_007303147.1  glutamine-tRNA ligase [Stereum hirsutum FP-91666 SS1]

    See identical proteins and their annotated locations for XP_007303147.1

    Status: PROVISIONAL

    Conserved Domains (5) summary
    PLN02859
    Location:9 → 856
    PLN02859; glutamine-tRNA ligase
    cd00807
    Location:258 → 571
    GlnRS_core; catalytic core domain of glutaminyl-tRNA synthetase
    pfam03950
    Location:569 → 743
    tRNA-synt_1c_C; tRNA synthetases class I (E and Q), anti-codon binding domain
    pfam04557
    Location:227 → 241
    tRNA_synt_1c_R2; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2
    pfam04558
    Location:19 → 169
    tRNA_synt_1c_R1; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
Nucleotide Protein
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Gene LinkOut

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Other Literature Sources
Molecular Biology Databases