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LOC18105329 very-long-chain aldehyde decarbonylase CER1 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18105329, updated on 23-Nov-2023

Summary

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Gene symbol
LOC18105329
Gene description
very-long-chain aldehyde decarbonylase CER1
Locus tag
POPTR_014G152600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC18105329 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 14 NC_037298.2 (10690600..10694619, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 14 NC_037298.1 (11844707..11848744, complement)

Chromosome 14 - NC_037298.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112324153 Neighboring gene septum-promoting GTP-binding protein 1 Neighboring gene glutamate receptor 3.4 Neighboring gene very-long-chain aldehyde decarbonylase CER1 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 8 Neighboring gene major allergen Pru ar 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain aldehyde decarbonylase CER1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037298.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    10690600..10694619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024585833.2 → XP_024441601.1  very-long-chain aldehyde decarbonylase CER1 isoform X2

    UniProtKB/TrEMBL
    A0A2K1XW77
    Conserved Domains (1) summary
    cl26394
    Location:1 → 584
    Wax2_C; WAX2 C-terminal domain

  2. XM_024585832.2 → XP_024441600.1  very-long-chain aldehyde decarbonylase CER1 isoform X1

    UniProtKB/TrEMBL
    A0A2K1XW77, A0A2K1XW83
    Conserved Domains (1) summary
    PLN02869
    Location:1 → 618
    PLN02869; fatty aldehyde decarbonylase
Nucleotide Protein
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