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CHC_T00010182001 potential copper-zinc superoxide dismutase, CuZn SOD2 [ Chondrus crispus (carragheen) ]

Gene ID: 17319270, updated on 16-Nov-2023

Summary

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Gene symbol
CHC_T00010182001
Gene description
potential copper-zinc superoxide dismutase, CuZn SOD2
Locus tag
CHC_T00010182001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Chondrus crispus (strain: Stackhouse)
Lineage
Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales; Gigartinaceae; Chondrus
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Genomic context

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Exon count:
2

NW_005178758.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Phosphatidate cytidylyltransferase Neighboring gene Adenylyltransferase and sulfurtransferase, MOCS3 Neighboring gene TPR repeat-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005178758.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Collén J, et al. Proc Natl Acad Sci U S A, 2013 Mar 26. PMID 23503846, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potential copper-zinc superoxide dismutase, CuZn SOD2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178758.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005711494.1 → XP_005711551.1  potential copper-zinc superoxide dismutase, CuZn SOD2 [Chondrus crispus]

    See identical proteins and their annotated locations for XP_005711551.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R7QRY5
    Conserved Domains (1) summary
    pfam00080
    Location:62 → 199
    Sod_Cu; Copper/zinc superoxide dismutase (SODC)
Nucleotide Protein
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Gene LinkOut

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