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EMIHUDRAFT_249590 oligosaccharyl transferase [ Emiliania huxleyi CCMP1516 ]

Gene ID: 17253516, updated on 28-Dec-2023

Summary

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Gene symbol
EMIHUDRAFT_249590
Gene description
oligosaccharyl transferase
Locus tag
EMIHUDRAFT_249590
Gene type
protein coding
RNA name
oligosaccharyl transferase
RefSeq status
PROVISIONAL
Organism
Emiliania huxleyi CCMP1516 (strain: CCMP1516)
Lineage
Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania
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Genomic context

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Location:
chromosome: Unknown
Exon count:
16

NW_005196035.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005196035.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pan genome of the phytoplankton Emiliania underpins its global distribution. Read BA, et al. Nature, 2013 Jul 11. PMID 23760476

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
oligosaccharyl transferase
XP_005759795.1
  • Contains conserved domains with sequence homology to both (1) the oligosaccharyl transferase STT3 subunit which is part of the oligosaccharyl complex of proteins that transfer lipid-linked core-oligosaccharides to selected asparagine residues in the ER and (2)the PMT superfamily of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005196035.1 Reference assembly

    Range
    9961..16195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005759738.1 → XP_005759795.1  oligosaccharyl transferase [Emiliania huxleyi CCMP1516]

    See identical proteins and their annotated locations for XP_005759795.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R1D8X7
    Conserved Domains (1) summary
    cl21590
    Location:7 → 467
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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Molecular Biology Databases