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BICDL3P BICD family like 3, pseudogene [ Homo sapiens (human) ]

Gene ID: 171022, updated on 10-Dec-2024

Summary

Official Symbol
BICDL3Pprovided by HGNC
Official Full Name
BICD family like 3, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:18289
See related
MIM:612545; AllianceGenome:HGNC:18289
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
WBSCR26; LINC00035; ABHD11-AS1; NCRNA00035
Expression
Biased expression in duodenum (RPKM 11.3), small intestine (RPKM 9.7) and 5 other tissues See more
Orthologs
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Genomic context

See BICDL3P in Genome Data Viewer
Location:
7q11.23
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (73735069..73736000)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (74935968..74936899)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (73149399..73150330)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene syntaxin 1A Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:73129777-73130308 Neighboring gene microRNA 4284 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18261 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18262 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18263 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18264 Neighboring gene Sharpr-MPRA regulatory region 8580 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26129 Neighboring gene RNA, 7SL, cytoplasmic 265, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:73152931-73153588 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:73153589-73154245 Neighboring gene abhydrolase domain containing 11 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:73156848-73158047 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:73175993-73176570 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:73176571-73177148 Neighboring gene claudin 3

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • ABHD11 antisense RNA 1 (non-protein coding)
  • ABHD11 antisense RNA 1 (tail to tail)
  • Williams Beuren syndrome chromosome region 26 (non-protein coding)
  • long intergenic non-protein coding RNA 35

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026690.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073846, CV575750

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    73735069..73736000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    74935968..74936899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)