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CYME_CMT533C probable tyrosine aminotransferase [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16997772, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMT533C
Gene description
probable tyrosine aminotransferase
Locus tag
CYME_CMT533C
Gene type
protein coding
RNA name
probable tyrosine aminotransferase
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 20
Exon count:
1
Sequence:
Chromosome: 20; NC_010146.1 (1336750..1339122)

Chromosome 20 - NC_010146.1Genomic Context describing neighboring genes Neighboring gene similar to phenylamine binding protein, sterol isomerase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene similar to zinc transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010146.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
probable tyrosine aminotransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010146.1 Reference assembly

    Range
    1336750..1339122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005539430.1 → XP_005539487.1  probable tyrosine aminotransferase [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005539487.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1UY04
    Conserved Domains (2) summary
    cd00609
    Location:415 → 782
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    TIGR01265
    Location:382 → 785
    tyr_nico_aTase; tyrosine/nicotianamine family aminotransferase
Nucleotide Protein
Heading Accession and Version

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