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CYME_CMT195C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16997741, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMT195C
Gene description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d
Locus tag
CYME_CMT195C
Gene type
protein coding
RNA name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 20
Exon count:
1
Sequence:
Chromosome: 20; NC_010146.1 (502402..504351)

Chromosome 20 - NC_010146.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene nonsense-mediated mRNA decay protein 3 Neighboring gene small GTP-binding protein Sar1 Neighboring gene 40S ribosomal protein S27

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010146.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010146.1 Reference assembly

    Range
    502402..504351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005539164.1 → XP_005539221.1  SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005539221.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1V7K7
    Conserved Domains (1) summary
    pfam02201
    Location:324 → 377
    SWIB; SWIB/MDM2 domain
Nucleotide Protein
Heading Accession and Version

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