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CYME_CMT565C DNA recombination protein DMC1 [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16997713, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMT565C
Gene description
DNA recombination protein DMC1
Locus tag
CYME_CMT565C
Gene type
protein coding
RNA name
DNA recombination protein DMC1
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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See CYME_CMT565C in Genome Data Viewer
Location:
chromosome: 20
Exon count:
1
Sequence:
Chromosome: 20; NC_010146.1 (1429878..1431101, complement)

Chromosome 20 - NC_010146.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene TATA-box binding protein-associated factor 2 Neighboring gene hypothetical protein Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010146.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA strand exchange activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA recombinase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA strand invasion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromosome organization involved in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in condensed nuclear chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
DNA recombination protein DMC1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010146.1 Reference assembly

    Range
    1429878..1431101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005539457.1 → XP_005539514.1  DNA recombination protein DMC1 [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005539514.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1VMR9
    Conserved Domains (2) summary
    PTZ00035
    Location:87 → 407
    PTZ00035; Rad51 protein; Provisional
    cd01123
    Location:171 → 402
    Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...
Nucleotide Protein
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