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CYME_CMP166C phycocyanin-associated rod linker protein [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16996094, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMP166C
Gene description
phycocyanin-associated rod linker protein
Locus tag
CYME_CMP166C
Gene type
protein coding
RNA name
phycocyanin-associated rod linker protein
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 16
Exon count:
1
Sequence:
Chromosome: 16; NC_010142.1 (422229..423464)

Chromosome 16 - NC_010142.1Genomic Context describing neighboring genes Neighboring gene similar to ribonuclease III Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010142.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in photosynthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phycobilisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
phycocyanin-associated rod linker protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010142.1 Reference assembly

    Range
    422229..423464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005537776.1 → XP_005537833.1  phycocyanin-associated rod linker protein [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005537833.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1VFP4
    Conserved Domains (2) summary
    pfam00427
    Location:158 → 277
    PBS_linker_poly; Phycobilisome Linker polypeptide
    cl03191
    Location:364 → 405
    CpcD; CpcD/allophycocyanin linker domain
Nucleotide Protein
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