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CYME_CMN109C similar to AhpC/TSA family protein [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16995338, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMN109C
Gene description
similar to AhpC/TSA family protein
Locus tag
CYME_CMN109C
Gene type
protein coding
RNA name
similar to AhpC/TSA family protein
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_010140.1 (284980..285717)

Chromosome 14 - NC_010140.1Genomic Context describing neighboring genes Neighboring gene similar to regulator of nonsense transcript stability Neighboring gene similar to 60S ribosomal subunit biogenesis protein Nip7p Neighboring gene hypothetical protein Neighboring gene similar to protein disulfide isomerase-related protein P5 precursor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010140.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thioredoxin peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
similar to AhpC/TSA family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010140.1 Reference assembly

    Range
    284980..285717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005537204.1 → XP_005537261.1  similar to AhpC/TSA family protein [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005537261.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1V5T4
    Conserved Domains (2) summary
    cd03013
    Location:85 → 237
    PRX5_like; Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol. The cellular location of PRX5 ...
    pfam00578
    Location:85 → 217
    AhpC-TSA; AhpC/TSA family
Nucleotide Protein
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