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CYME_CML030C DnaJ homolog, subfamily A [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16994694, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CML030C
Gene description
DnaJ homolog, subfamily A
Locus tag
CYME_CML030C
Gene type
protein coding
RNA name
DnaJ homolog, subfamily A
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_010138.1 (66055..67338, complement)

Chromosome 12 - NC_010138.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene mitochondrial F-type ATPase F1 subunit gamma, precursor Neighboring gene sodium-dependent transporter Neighboring gene similar to vesicle docking protein SEC34

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010138.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
DnaJ homolog, subfamily A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010138.1 Reference assembly

    Range
    66055..67338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005536642.1 → XP_005536699.1  DnaJ homolog, subfamily A [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005536699.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1VI20
    Conserved Domains (4) summary
    cd10719
    Location:147 → 217
    DnaJ_zf; Zinc finger domain of DnaJ and HSP40
    cd10747
    Location:118 → 350
    DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
    PTZ00037
    Location:10 → 427
    PTZ00037; DnaJ_C chaperone protein; Provisional
    pfam00226
    Location:16 → 76
    DnaJ; DnaJ domain
Nucleotide Protein
Heading Accession and Version

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