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CYME_CML214C ornithine carbamoyltransferase [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16994635, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CML214C
Gene description
ornithine carbamoyltransferase
Locus tag
CYME_CML214C
Gene type
protein coding
RNA name
ornithine carbamoyltransferase
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_010138.1 (537360..538472, complement)

Chromosome 12 - NC_010138.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010138.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ornithine carbamoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine biosynthetic process via ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in citrulline biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ornithine carbamoyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010138.1 Reference assembly

    Range
    537360..538472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005536788.1 → XP_005536845.1  ornithine carbamoyltransferase [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005536845.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1V8Q1
    Conserved Domains (3) summary
    PLN02342
    Location:43 → 368
    PLN02342; ornithine carbamoyltransferase
    pfam00185
    Location:214 → 366
    OTCace; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
    pfam02729
    Location:70 → 207
    OTCace_N; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
Nucleotide Protein
Heading Accession and Version

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