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CYME_CMJ257C single subunit mitochondrial RNA polymerase [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16993965, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMJ257C
Gene description
single subunit mitochondrial RNA polymerase
Locus tag
CYME_CMJ257C
Gene type
protein coding
RNA name
single subunit mitochondrial RNA polymerase
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 10
Exon count:
1
Sequence:
Chromosome: 10; NC_010136.1 (691915..695673)

Chromosome 10 - NC_010136.1Genomic Context describing neighboring genes Neighboring gene similar to gamma-tubulin complex protein 2 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene similar to prenylated rab acceptor PRA1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010136.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial DNA-directed RNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
single subunit mitochondrial RNA polymerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010136.1 Reference assembly

    Range
    691915..695673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005534914.1 → XP_005534971.1  single subunit mitochondrial RNA polymerase [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005534971.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1V872
    Conserved Domains (3) summary
    PHA00452
    Location:424 → 1251
    PHA00452; T3/T7-like RNA polymerase
    pfam00940
    Location:866 → 1251
    RNA_pol; DNA-dependent RNA polymerase
    pfam14700
    Location:424 → 726
    RPOL_N; DNA-directed RNA polymerase N-terminal
Nucleotide Protein
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