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TMEM252 transmembrane protein 252 [ Homo sapiens (human) ]

Gene ID: 169693, updated on 23-Nov-2021

Summary

Official Symbol
TMEM252provided by HGNC
Official Full Name
transmembrane protein 252provided by HGNC
Primary source
HGNC:HGNC:28537
See related
Ensembl:ENSG00000181778
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C9orf71
Expression
Biased expression in kidney (RPKM 12.2), small intestine (RPKM 10.6) and 10 other tissues See more
Orthologs
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Genomic context

See TMEM252 in Genome Data Viewer
Location:
9q21.11
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (68536580..68540883, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (71151496..71155799, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene PGM5 antisense RNA 1 Neighboring gene uncharacterized LOC105376070 Neighboring gene phosphoglucomutase 5 Neighboring gene TMEM252 divergent transcript Neighboring gene long intergenic non-protein coding RNA 1506 Neighboring gene dermatan sulfate epimerase pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC34760

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
transmembrane protein 252
Names
transmembrane protein C9orf71

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153237.2NP_694969.1  transmembrane protein 252

    See identical proteins and their annotated locations for NP_694969.1

    Status: VALIDATED

    Source sequence(s)
    AL353616
    Consensus CDS
    CCDS35040.1
    UniProtKB/Swiss-Prot
    Q8N6L7
    Related
    ENSP00000366528.4, ENST00000377311.4
    Conserved Domains (1) summary
    pfam15664
    Location:29167
    TMEM252; Transmembrane protein 252 family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    68536580..68540883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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