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TMEM92 transmembrane protein 92 [ Homo sapiens (human) ]

Gene ID: 162461, updated on 5-Aug-2018

Summary

Official Symbol
TMEM92provided by HGNC
Official Full Name
transmembrane protein 92provided by HGNC
Primary source
HGNC:HGNC:26579
See related
Ensembl:ENSG00000167105 Vega:OTTHUMG00000162060
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in small intestine (RPKM 10.1), duodenum (RPKM 7.9) and 7 other tissues See more
Orthologs

Genomic context

See TMEM92 in Genome Data Viewer
Location:
17q21.33
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 17 NC_000017.11 (50271406..50281485)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (48348767..48358846)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371819 Neighboring gene uncharacterized LOC105371822 Neighboring gene TMEM92 antisense RNA 1 Neighboring gene xylosyltransferase 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ33318

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 
nucleus IDA
Inferred from Direct Assay
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_054733.1 RefSeqGene

    Range
    5001..15080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001168215.1NP_001161687.1  transmembrane protein 92 precursor

    See identical proteins and their annotated locations for NP_001161687.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC015909, AK090637, AW293202, AY358204
    Consensus CDS
    CCDS11562.1
    UniProtKB/Swiss-Prot
    Q6UXU6
    Related
    ENSP00000300433.3, OTTHUMP00000221160, ENST00000300433.7, OTTHUMT00000367053
    Conserved Domains (1) summary
    pfam11669
    Location:34127
    WBP-1; WW domain-binding protein 1
  2. NM_153229.2NP_694961.2  transmembrane protein 92 precursor

    See identical proteins and their annotated locations for NP_694961.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the shorter transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC015909, AK090637, AW293202, DB072318
    Consensus CDS
    CCDS11562.1
    UniProtKB/Swiss-Prot
    Q6UXU6
    Related
    ENSP00000425144.1, OTTHUMP00000221161, ENST00000507382.1, OTTHUMT00000367054
    Conserved Domains (1) summary
    pfam11669
    Location:34127
    WBP-1; WW domain-binding protein 1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p12 Primary Assembly

    Range
    50271406..50281485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006721730.3XP_006721793.1  transmembrane protein 92 isoform X1

    See identical proteins and their annotated locations for XP_006721793.1

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