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PTSG_05806 eukaryotic translation initiation factor 2 subunit 1 [ Salpingoeca rosetta ]

Gene ID: 16073269, updated on 14-Dec-2023

Summary

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Gene symbol
PTSG_05806
Gene description
eukaryotic translation initiation factor 2 subunit 1
Locus tag
PTSG_05806
Gene type
protein coding
RNA name
eukaryotic translation initiation factor 2 subunit 1
RefSeq status
PROVISIONAL
Organism
Salpingoeca rosetta (strain: ATCC 50818, culture-collection: ATCC:50818)
Lineage
Eukaryota; Choanoflagellida; Craspedida; Salpingoecidae; Salpingoeca
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Genomic context

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Location:
chromosome: Unknown
Exon count:
10

NW_004754919.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004754919.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic 48S preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 2B complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of multi-eIF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 2 subunit 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004754919.1 Reference assembly

    Range
    76365..79885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004992641.1 → XP_004992698.1  eukaryotic translation initiation factor 2 subunit 1 [Salpingoeca rosetta]

    See identical proteins and their annotated locations for XP_004992698.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F2UCU6
    Conserved Domains (3) summary
    COG1093
    Location:6 → 275
    SUI2; Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis]
    cd04452
    Location:14 → 89
    S1_IF2_alpha; S1_IF2_alpha: The alpha subunit of translation Initiation Factor 2, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. Eukaryotic and archaeal Initiation Factor 2 (e- and aIF2, respectively) ...
    pfam07541
    Location:127 → 236
    EIF_2_alpha; Eukaryotic translation initiation factor 2 alpha subunit
Protein Accession Links
GenPept Link UniProtKB Link
EGD74441.1

Gene LinkOut

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Molecular Biology Databases