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CYP21A1P cytochrome P450 family 21 subfamily A member 1, pseudogene [ Homo sapiens (human) ]

Gene ID: 1590, updated on 13-Mar-2020

Summary

Official Symbol
CYP21A1Pprovided by HGNC
Official Full Name
cytochrome P450 family 21 subfamily A member 1, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:2599
See related
Ensembl:ENSG00000204338
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CYP21A; CYP21P; P450c21A
Expression
Biased expression in adrenal (RPKM 198.1) and fat (RPKM 7.0) See more

Genomic context

See CYP21A1P in Genome Data Viewer
Location:
6p21.33
Exon count:
8
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (32005636..32008909)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (31973413..31976686)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 19 Neighboring gene decapping exoribonuclease Neighboring gene complement C4A (Rodgers blood group) Neighboring gene CYP21A1P recombination region Neighboring gene tenascin XA (pseudogene) recombination region Neighboring gene tenascin XA (pseudogene) Neighboring gene serine/threonine kinase 19B (pseudogene) Neighboring gene complement C4B (Chido blood group) Neighboring gene CYP21A2 5' regulatory region

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array.
NHGRI GWA Catalog

General gene information

Markers

Other Names

  • cytochrome P450, family 21, subfamily A, polypeptide 1 pseudogene
  • cytochrome P450, subfamily XXI (steroid 21-hydroxylase) pseudogene
  • cytochrome P450, subfamily XXIA (steroid 21-hydroxylase), polypeptide 1 pseudogene

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040090.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL645922
    Related
    ENST00000342991.10

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    32005636..32008909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_3

Genomic

  1. NT_167245.2 Reference GRCh38.p13 ALT_REF_LOCI_3

    Range
    3253411..3256684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_7

Genomic

  1. NT_167249.2 Reference GRCh38.p13 ALT_REF_LOCI_7

    Range
    3306825..3310098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_001111.1: Suppressed sequence

    Description
    NG_001111.1: This RefSeq was permanently suppressed since this pseudogene is currently represented on a region reference sequence for the bimodular haplotype of the MHC class III complement gene cluster on chr 6.
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