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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001044751.1 → NP_001038216.1 11-beta-hydroxysteroid dehydrogenase 1
See identical proteins and their annotated locations for NP_001038216.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein. An in-frame AUG is located 41 codons upstream of the annotated translation start site but is not being annotated as a start site since it is not conserved and is in a weak Kozak sequence context.
- Source sequence(s)
-
AI099306, AI132676, AK149518
- Consensus CDS
-
CCDS15635.1
- UniProtKB/Swiss-Prot
-
P50172
- UniProtKB/TrEMBL
-
Q4JHD9
- Related
- ENSMUSP00000016338.9, ENSMUST00000016338.15
- Conserved Domains (1) summary
-
- cd05332
Location:32 → 279
- 11beta-HSD1_like_SDR_c; 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs
-
NM_008288.2 → NP_032314.2 11-beta-hydroxysteroid dehydrogenase 1
See identical proteins and their annotated locations for NP_032314.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein. An in-frame AUG is located 41 codons upstream of the annotated translation start site but is not being annotated as a start site since it is not conserved and is in a weak Kozak sequence context.
- Source sequence(s)
-
AI132676, AI182353, DQ089001
- Consensus CDS
-
CCDS15635.1
- UniProtKB/Swiss-Prot
-
P50172
- UniProtKB/TrEMBL
-
Q4JHD9
- Related
- ENSMUSP00000125620.2, ENSMUST00000161737.8
- Conserved Domains (1) summary
-
- cd05332
Location:32 → 279
- 11beta-HSD1_like_SDR_c; 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000067.7 Reference GRCm39 C57BL/6J
- Range
-
192903948..192946353 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030249832.1 → XP_030105692.1 corticosteroid 11-beta-dehydrogenase isozyme 1 isoform X2
- UniProtKB/Swiss-Prot
-
P50172
- UniProtKB/TrEMBL
-
Q4JHD9
- Conserved Domains (1) summary
-
- cd05332
Location:32 → 279
- 11beta-HSD1_like_SDR_c; 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs
-
XM_006497228.3 → XP_006497291.1 corticosteroid 11-beta-dehydrogenase isozyme 1 isoform X1
- Conserved Domains (1) summary
-
- cd05332
Location:44 → 291
- 11beta-HSD1_like_SDR_c; 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs