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Hmga1 high mobility group AT-hook 1 [ Mus musculus (house mouse) ]

Gene ID: 15361, updated on 8-Jan-2023

Summary

Official Symbol
Hmga1provided by MGI
Official Full Name
high mobility group AT-hook 1provided by MGI
Primary source
MGI:MGI:96160
See related
Ensembl:ENSMUSG00000046711 AllianceGenome:MGI:96160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hmgi; Hmgy; Hmgiy; Hmga1a; Hmga1b
Summary
This locus encodes a member of the nuclear, non-histone high mobility group protein family. This architectural transcription factor binds to A-T rich DNA sequences and participates in enhanceosome formation, chromatin remodeling and regulation of transcription. This protein functions in many cellular processes, including cell growth and differentiation. Alternatively spliced transcript variants have been described. [provided by RefSeq, Oct 2009]
Expression
Ubiquitous expression in thymus adult (RPKM 119.5), liver E14.5 (RPKM 82.7) and 27 other tissues See more
Orthologs
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Genomic context

See Hmga1 in Genome Data Viewer
Location:
17 A3.3; 17 14.5 cM
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (27775548..27782646)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (27556574..27563672)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene 16005 Neighboring gene predicted gene 9703 Neighboring gene small integral membrane protein 29 Neighboring gene nudix hydrolase 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (7)  1 citation
  • Endonuclease-mediated (3) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC102580

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 5'-deoxyribose-5-phosphate lyase activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables DNA binding, bending ISO
Inferred from Sequence Orthology
more info
 
enables DNA-(apurinic or apyrimidinic site) endonuclease activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
Inferred from Direct Assay
more info
 
enables RNA binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cis-regulatory region sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables minor groove of adenine-thymine-rich DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables minor groove of adenine-thymine-rich DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables molecular adaptor activity ISO
Inferred from Sequence Orthology
more info
 
enables molecular function activator activity ISO
Inferred from Sequence Orthology
more info
 
enables nuclear receptor coactivator activity ISO
Inferred from Sequence Orthology
more info
 
enables nuclear retinoic acid receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables nuclear retinoid X receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables peroxisome proliferator activated receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables structural constituent of chromatin TAS
Traceable Author Statement
more info
PubMed 
enables transcription coactivator activity IDA
Inferred from Direct Assay
more info
PubMed 
enables transcription coactivator activity ISO
Inferred from Sequence Orthology
more info
 
enables transcription coregulator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables transcription coregulator binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in male germ cell nucleus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in senescence-associated heterochromatin focus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
high mobility group protein HMG-I/HMG-Y
Names
high mobility group AT-hook protein 1
high mobility group protein A1
high mobility group protein I

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025427.3NP_001020598.1  high mobility group protein HMG-I/HMG-Y isoform a

    See identical proteins and their annotated locations for NP_001020598.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 through 5 encode the same isoform (a), also known as isoform I.
    Source sequence(s)
    AK171334, AV018894, BY270784
    Consensus CDS
    CCDS28564.1
    UniProtKB/Swiss-Prot
    P17095, Q924L8
    UniProtKB/TrEMBL
    Q566K0
    Related
    ENSMUSP00000156173.2, ENSMUST00000232265.2
  2. NM_001039356.2NP_001034445.1  high mobility group protein HMG-I/HMG-Y isoform a

    See identical proteins and their annotated locations for NP_001034445.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1 through 5 encode the same isoform (a), also known as isoform I.
    Source sequence(s)
    AK171334, AV018894, BY270784, GH454882
    Consensus CDS
    CCDS28564.1
    UniProtKB/Swiss-Prot
    P17095, Q924L8
    UniProtKB/TrEMBL
    Q566K0
    Related
    ENSMUSP00000113015.2, ENSMUST00000118599.9
    Conserved Domains (1) summary
    pfam06217
    Location:487
    GAGA_bind; GAGA binding protein-like family
  3. NM_001166535.1NP_001160007.1  high mobility group protein HMG-I/HMG-Y isoform a

    See identical proteins and their annotated locations for NP_001160007.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1 through 5 encode the same isoform (a), also known as isoform I.
    Source sequence(s)
    AK171334, AV018894, BY165675, BY270784
    Consensus CDS
    CCDS28564.1
    UniProtKB/Swiss-Prot
    P17095, Q924L8
    UniProtKB/TrEMBL
    Q566K0
    Related
    ENSMUSP00000113916.2, ENSMUST00000119486.9
    Conserved Domains (1) summary
    pfam06217
    Location:487
    GAGA_bind; GAGA binding protein-like family
  4. NM_001166536.1NP_001160008.1  high mobility group protein HMG-I/HMG-Y isoform a

    See identical proteins and their annotated locations for NP_001160008.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1 through 5 encode the same isoform (a), also known as isoform I.
    Source sequence(s)
    AK171334, AV018894, BY270784
    Consensus CDS
    CCDS28564.1
    UniProtKB/Swiss-Prot
    P17095, Q924L8
    UniProtKB/TrEMBL
    Q566K0
    Related
    ENSMUSP00000155886.2, ENSMUST00000232013.2
    Conserved Domains (1) summary
    pfam06217
    Location:487
    GAGA_bind; GAGA binding protein-like family
  5. NM_001166537.1NP_001160009.1  high mobility group protein HMG-I/HMG-Y isoform b

    See identical proteins and their annotated locations for NP_001160009.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) uses an alternate, in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 6 through 10 encode the same isoform (b), also known as isoform Y.
    Source sequence(s)
    AK155661, AK171334, AV018894, BM937661, CF730372
    Consensus CDS
    CCDS50044.1
    UniProtKB/Swiss-Prot
    P17095
    UniProtKB/TrEMBL
    Q3TVP0, Q566K0
    Related
    ENSMUSP00000114101.2, ENSMUST00000118570.2
    Conserved Domains (1) summary
    PRK10475
    Location:3175
    PRK10475; 23S rRNA pseudouridine synthase F; Provisional
  6. NM_001166539.1NP_001160011.1  high mobility group protein HMG-I/HMG-Y isoform b

    See identical proteins and their annotated locations for NP_001160011.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) differs in the 5' UTR and uses an alternate, in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 6 through 10 encode the same isoform (b), also known as isoform Y.
    Source sequence(s)
    AK171334, AV018894, BY270784, GH454882
    Consensus CDS
    CCDS50044.1
    UniProtKB/Swiss-Prot
    P17095
    UniProtKB/TrEMBL
    Q3TVP0, Q566K0
    Related
    ENSMUSP00000156327.2, ENSMUST00000231825.2
    Conserved Domains (1) summary
    PRK10475
    Location:3175
    PRK10475; 23S rRNA pseudouridine synthase F; Provisional
  7. NM_001166540.1NP_001160012.1  high mobility group protein HMG-I/HMG-Y isoform b

    See identical proteins and their annotated locations for NP_001160012.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) differs in the 5' UTR and uses an alternate, in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 6 through 10 encode the same isoform (b), also known as isoform Y.
    Source sequence(s)
    AK155661, AK171334, AV018894, BY165675, BY270784
    Consensus CDS
    CCDS50044.1
    UniProtKB/Swiss-Prot
    P17095
    UniProtKB/TrEMBL
    Q3TVP0, Q566K0
    Related
    ENSMUSP00000156044.2, ENSMUST00000232552.2
    Conserved Domains (1) summary
    PRK10475
    Location:3175
    PRK10475; 23S rRNA pseudouridine synthase F; Provisional
  8. NM_001166541.1NP_001160013.1  high mobility group protein HMG-I/HMG-Y isoform b

    See identical proteins and their annotated locations for NP_001160013.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (9) differs in the 5' UTR and uses an alternate, in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 6 through 10 encode the same isoform (b), also known as isoform Y.
    Source sequence(s)
    AK155661, AK171334, AV018894, BY270784
    Consensus CDS
    CCDS50044.1
    UniProtKB/Swiss-Prot
    P17095
    UniProtKB/TrEMBL
    Q3TVP0, Q566K0
    Related
    ENSMUSP00000110538.4, ENSMUST00000114888.11
    Conserved Domains (1) summary
    PRK10475
    Location:3175
    PRK10475; 23S rRNA pseudouridine synthase F; Provisional
  9. NM_001166542.1NP_001160014.1  high mobility group protein HMG-I/HMG-Y isoform b

    See identical proteins and their annotated locations for NP_001160014.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (10) differs in the 5' UTR and uses an alternate, in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 6 through 10 encode the same isoform (b), also known as isoform Y.
    Source sequence(s)
    AK155661, AK171334, AV018894, BY270784
    Consensus CDS
    CCDS50044.1
    UniProtKB/Swiss-Prot
    P17095
    UniProtKB/TrEMBL
    Q3TVP0, Q566K0
    Related
    ENSMUSP00000155876.2, ENSMUST00000231358.2
    Conserved Domains (1) summary
    PRK10475
    Location:3175
    PRK10475; 23S rRNA pseudouridine synthase F; Provisional
  10. NM_001166543.1NP_001160015.1  high mobility group protein HMG-I/HMG-Y isoform c

    See identical proteins and their annotated locations for NP_001160015.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (11) differs in the 5' UTR and uses an alternate, in-frame splice site in the 3' coding region compared to variant 1. The encoded isoform (c) is shorter than isoform a. Variants 11 and 12 encode the same isoform (c).
    Source sequence(s)
    AK171334, AV018894, BY165675, BY270784
    Consensus CDS
    CCDS89033.1
    UniProtKB/TrEMBL
    Q3TE85, Q566K0
    Related
    ENSMUSP00000155874.2, ENSMUST00000232253.2
    Conserved Domains (1) summary
    pfam06217
    Location:4101
    GAGA_bind; GAGA binding protein-like family
  11. NM_001166544.1NP_001160016.1  high mobility group protein HMG-I/HMG-Y isoform c

    See identical proteins and their annotated locations for NP_001160016.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (12) differs in the 5' UTR and uses an alternate, in-frame splice site in the 3' coding region compared to variant 1. The encoded isoform (c) is shorter than isoform a. Variants 11 and 12 encode the same isoform (c).
    Source sequence(s)
    AK171334, AV018894, BY270784
    Consensus CDS
    CCDS89033.1
    UniProtKB/TrEMBL
    Q3TE85, Q566K0
    Related
    ENSMUSP00000113068.3, ENSMUST00000117600.9
    Conserved Domains (1) summary
    pfam06217
    Location:4101
    GAGA_bind; GAGA binding protein-like family
  12. NM_001166545.1NP_001160017.1  high mobility group protein HMG-I/HMG-Y isoform d

    Status: REVIEWED

    Description
    Transcript Variant: This variant (13) differs in the 5' UTR and uses an alternate, in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (d) is longer than isoform a.
    Source sequence(s)
    AK171334, AV018894, BY270784, CF951929
    Consensus CDS
    CCDS89032.1
    UniProtKB/TrEMBL
    A0A338P6E8, Q566K0
    Related
    ENSMUSP00000155922.2, ENSMUST00000231796.2
  13. NM_001166546.1NP_001160018.1  high mobility group protein HMG-I/HMG-Y isoform e

    Status: REVIEWED

    Description
    Transcript Variant: This variant (14) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform e, which has a longer and distinct C-terminus, compared to isoform a.
    Source sequence(s)
    AK171334, AV018894, BY270784
    Consensus CDS
    CCDS89034.1
    UniProtKB/TrEMBL
    A0A338P6F6, Q566K0
    Related
    ENSMUSP00000155966.2, ENSMUST00000231866.2
  14. NM_001412718.1NP_001399647.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TVP0
  15. NM_001412721.1NP_001399650.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6D0, A0A8C6GH72
  16. NM_001412722.1NP_001399651.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6D0, A0A8C6GH72
  17. NM_001412723.1NP_001399652.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6F6
  18. NM_001412724.1NP_001399653.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6F6
  19. NM_001412726.1NP_001399655.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6D0, A0A8C6GH72
  20. NM_001412727.1NP_001399656.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6F6
  21. NM_001412728.1NP_001399657.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6D0, A0A8C6GH72
  22. NM_001412729.1NP_001399658.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6E8
  23. NM_001412730.1NP_001399659.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A338P6E8
  24. NM_001412731.1NP_001399660.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/Swiss-Prot
    Q924L8
    UniProtKB/TrEMBL
    Q566K0
  25. NM_001412732.1NP_001399661.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/Swiss-Prot
    Q924L8
    UniProtKB/TrEMBL
    Q566K0
  26. NM_001412733.1NP_001399662.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/Swiss-Prot
    Q924L8
    UniProtKB/TrEMBL
    Q566K0
  27. NM_001412740.1NP_001399669.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/Swiss-Prot
    Q924L8
    UniProtKB/TrEMBL
    Q566K0
  28. NM_001412748.1NP_001399677.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  29. NM_001412749.1NP_001399678.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  30. NM_001412750.1NP_001399679.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  31. NM_001412751.1NP_001399680.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  32. NM_001412752.1NP_001399681.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  33. NM_001412754.1NP_001399683.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  34. NM_001412755.1NP_001399684.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  35. NM_001412764.1NP_001399693.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  36. NM_001412765.1NP_001399694.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  37. NM_001412766.1NP_001399695.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TE85
  38. NM_001412767.1NP_001399696.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TE85
  39. NM_001412768.1NP_001399697.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TE85
  40. NM_001412769.1NP_001399698.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TE85
  41. NM_001412770.1NP_001399699.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  42. NM_001412771.1NP_001399700.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  43. NM_001412772.1NP_001399701.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  44. NM_001412773.1NP_001399702.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  45. NM_001412783.1NP_001399712.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TVP0
  46. NM_001412943.1NP_001399872.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  47. NM_001412944.1NP_001399873.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  48. NM_001412945.1NP_001399874.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  49. NM_001412949.1NP_001399878.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TVP0
  50. NM_001412950.1NP_001399879.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    Q3TVP0
  51. NM_001412951.1NP_001399880.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A384DV79
  52. NM_001412952.1NP_001399881.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A384DV79
  53. NM_001412953.1NP_001399882.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
    UniProtKB/TrEMBL
    A0A384DV79
  54. NM_001412954.1NP_001399883.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  55. NM_001412955.1NP_001399884.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  56. NM_001412956.1NP_001399885.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  57. NM_001412957.1NP_001399886.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  58. NM_001412958.1NP_001399887.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  59. NM_001412959.1NP_001399888.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  60. NM_001413142.1NP_001400071.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  61. NM_001413143.1NP_001400072.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  62. NM_001413144.1NP_001400073.1  high mobility group protein HMG-I/HMG-Y

    Status: REVIEWED

    Source sequence(s)
    AC127341
  63. NM_016660.3NP_057869.2  high mobility group protein HMG-I/HMG-Y isoform a

    See identical proteins and their annotated locations for NP_057869.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes isoform a. Variants 1 through 5 encode the same isoform (a), also known as isoform I.
    Source sequence(s)
    AK171334, AV018894, BM937661, CF730372
    Consensus CDS
    CCDS28564.1
    UniProtKB/Swiss-Prot
    P17095, Q924L8
    UniProtKB/TrEMBL
    Q566K0
    Related
    ENSMUSP00000156199.2, ENSMUST00000231874.2
    Conserved Domains (1) summary
    pfam06217
    Location:487
    GAGA_bind; GAGA binding protein-like family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    27775548..27782646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030249514.2XP_030105374.1  high mobility group protein HMG-I/HMG-Y isoform X1

  2. XM_030249515.2XP_030105375.1  high mobility group protein HMG-I/HMG-Y isoform X2