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TEX28 testis expressed 28 [ Homo sapiens (human) ]

Gene ID: 1527, updated on 27-Jun-2021

Summary

Official Symbol
TEX28provided by HGNC
Official Full Name
testis expressed 28provided by HGNC
Primary source
HGNC:HGNC:2563
See related
Ensembl:ENSG00000278057 MIM:300092
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
fTEX; MRX99; CXorf2; TEX28P1; TEX28P2
Expression
Restricted expression toward testis (RPKM 2.4) See more
Orthologs
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Genomic context

See TEX28 in Genome Data Viewer
Location:
Xq28
Exon count:
8
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (154271265..154295356, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X (PATCHES) NW_003871103.3 (1705244..1729190, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene testis expressed 28 pseudogene Neighboring gene opsin 1, medium wave sensitive 3 Neighboring gene transketolase like 1 Neighboring gene uncharacterized LOC105373386 Neighboring gene Xq28 proximal FLNA-EMD recombination region

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
testis-specific protein TEX28

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205201.2NP_001192130.1  testis-specific protein TEX28

    See identical proteins and their annotated locations for NP_001192130.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) differs in the 5' UTR compared to variant 2. Variants 1 and 2 both encode the same protein.
    Source sequence(s)
    AC245140
    Consensus CDS
    CCDS14744.2
    UniProtKB/Swiss-Prot
    O15482
    Related
    ENSP00000478834.1, ENST00000619903.4
    Conserved Domains (1) summary
    pfam10267
    Location:48380
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
  2. NM_001586.3NP_001577.1  testis-specific protein TEX28

    See identical proteins and their annotated locations for NP_001577.1

    Status: VALIDATED

    Source sequence(s)
    AC245140
    Consensus CDS
    CCDS14744.2
    UniProtKB/Swiss-Prot
    O15482
    Related
    ENSP00000482010.1, ENST00000617225.4
    Conserved Domains (1) summary
    pfam10267
    Location:48380
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    154271265..154295356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011531118.2XP_011529420.1  testis-specific protein TEX28 isoform X2

    See identical proteins and their annotated locations for XP_011529420.1

    Conserved Domains (1) summary
    pfam10267
    Location:51383
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
  2. XM_011531117.1XP_011529419.1  testis-specific protein TEX28 isoform X2

    See identical proteins and their annotated locations for XP_011529419.1

    Conserved Domains (1) summary
    pfam10267
    Location:51383
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
  3. XM_011531116.1XP_011529418.1  testis-specific protein TEX28 isoform X1

    Conserved Domains (1) summary
    pfam10267
    Location:110442
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
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