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LINC02877 long intergenic non-protein coding RNA 2877 [ Homo sapiens (human) ]

Gene ID: 152118, updated on 13-May-2022

Summary

Official Symbol
LINC02877provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2877provided by HGNC
Primary source
HGNC:HGNC:37259
See related
Ensembl:ENSG00000237787 AllianceGenome:HGNC:37259
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C3orf79
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See LINC02877 in Genome Data Viewer
Location:
3q25.2
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (153484495..153502697)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (156255174..156273395)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (153202284..153220486)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2006 Neighboring gene long intergenic non-protein coding RNA 2083 Neighboring gene RNA, U6 small nuclear 901, pseudogene Neighboring gene U8 small nucleolar RNA Neighboring gene ribosomal protein L21 pseudogene 42

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_160966.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC078788
    Related
    ENST00000623038.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    153484495..153502697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    156255174..156273395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)