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MAGI1-IT1 MAGI1 intronic transcript 1 [ Homo sapiens (human) ]

Gene ID: 151877, updated on 18-May-2021

Summary

Official Symbol
MAGI1-IT1provided by HGNC
Official Full Name
MAGI1 intronic transcript 1provided by HGNC
Primary source
HGNC:HGNC:42436
See related
Ensembl:ENSG00000272610
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See MAGI1-IT1 in Genome Data Viewer
Location:
3p14.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (65872814..65954558, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (65858489..65940233, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 1 Neighboring gene uncharacterized LOC107986018 Neighboring gene ribosomal protein L17 pseudogene 17 Neighboring gene MAGI1 antisense RNA 1 Neighboring gene uncharacterized LOC105377128 Neighboring gene uncharacterized LOC107986095 Neighboring gene solute carrier family 25 member 26

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Potential readthrough

Included gene: MAGI1

Other Names

  • MAGI1 intronic transcript 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145422.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK056866, BQ006502
    Related
    ENST00000460754.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    65872814..65954558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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