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GCSIR GPR55 cis regulatory suppressor of immune response RNA [ Homo sapiens (human) ]

Gene ID: 151484, updated on 23-Nov-2021

Summary

Official Symbol
GCSIRprovided by HGNC
Official Full Name
GPR55 cis regulatory suppressor of immune response RNAprovided by HGNC
Primary source
HGNC:HGNC:54400
See related
Ensembl:ENSG00000232520
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Lnc-ITM2C-1
Expression
Low expression observed in reference dataset See more
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Genomic context

See GCSIR in Genome Data Viewer
Location:
2q37.1
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (230886546..230904517)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (231751261..231769232)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene calcium binding protein 39 Neighboring gene Sharpr-MPRA regulatory region 14077 Neighboring gene integral membrane protein 2C Neighboring gene G protein-coupled receptor 55 Neighboring gene COX20 pseudogene 2 Neighboring gene SPATA3 antisense RNA 1 (head to head)

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038238.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012507
    Related
    ENST00000415628.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    230886546..230904517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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