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FAM117B family with sequence similarity 117 member B [ Homo sapiens (human) ]

Gene ID: 150864, updated on 1-Jun-2020

Summary

Official Symbol
FAM117Bprovided by HGNC
Official Full Name
family with sequence similarity 117 member Bprovided by HGNC
Primary source
HGNC:HGNC:14440
See related
Ensembl:ENSG00000138439
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ALS2CR13
Expression
Ubiquitous expression in testis (RPKM 4.9), adrenal (RPKM 4.8) and 25 other tissues See more
Orthologs

Genomic context

See FAM117B in Genome Data Viewer
Location:
2q33.2
Exon count:
8
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (202634969..202769757)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (203499901..203634480)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MT-ND4 pseudogene 30 Neighboring gene MT-CO1 pseudogene 54 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class Y pseudogene Neighboring gene islet cell autoantigen 1 like Neighboring gene keratin 8 pseudogene 15

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ38771, DKFZp686H01244

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
protein FAM117B
Names
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 13
amyotrophic lateral sclerosis 2 chromosomal region candidate gene 13 protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173511.4NP_775782.2  protein FAM117B

    See identical proteins and their annotated locations for NP_775782.2

    Status: VALIDATED

    Source sequence(s)
    AC009960, AC098831, AK096090, BX537704, CN397358
    Consensus CDS
    CCDS33362.2
    UniProtKB/Swiss-Prot
    Q6P1L5
    UniProtKB/TrEMBL
    Q7Z3M2
    Related
    ENSP00000376071.2, ENST00000392238.3
    Conserved Domains (1) summary
    pfam15388
    Location:218529
    FAM117; Protein Family FAM117

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    202634969..202769757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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