Format

Send to:

Choose Destination

RAB6D RAB6D, member RAS oncogene family [ Homo sapiens (human) ]

Gene ID: 150786, updated on 5-Jan-2022

Summary

Official Symbol
RAB6Dprovided by HGNC
Official Full Name
RAB6D, member RAS oncogene familyprovided by HGNC
Primary source
HGNC:HGNC:30272
See related
Ensembl:ENSG00000233087
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RAB6CL; WTH3DI
Summary
Predicted to enable GTPase activity. Predicted to be involved in Golgi vesicle transport; intracellular protein transport; and retrograde transport, endosome to Golgi. Located in Golgi apparatus. [provided by Alliance of Genome Resources, Nov 2021]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See RAB6D in Genome Data Viewer
Location:
2q21.1
Exon count:
1
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (131360492..131364168, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (132118065..132121741, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ARHGAP42 pseudogene 1 Neighboring gene fatty acyl-CoA reductase 2 pseudogene Neighboring gene SSBP3 pseudogene 2 Neighboring gene MT-CYB pseudogene 10 Neighboring gene MT-ND6 pseudogene 10

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in retrograde transport, endosome to Golgi IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
ras-related protein Rab-6D
Names
RAB6C-like
rab6-like protein WTH3DI

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077637.3NP_001071105.1  ras-related protein Rab-6D

    See identical proteins and their annotated locations for NP_001071105.1

    Status: VALIDATED

    Source sequence(s)
    AC073869
    Consensus CDS
    CCDS82514.1
    UniProtKB/TrEMBL
    Q53S08
    Related
    ENSP00000490038.1, ENST00000623617.3
    Conserved Domains (1) summary
    cd01861
    Location:14174
    Rab6; Rab GTPase family 6 (Rab6)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    131360492..131364168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_001554.1: Suppressed sequence

    Description
    NG_001554.1: This RefSeq was suppressed because there is evidence to suggest the locus is transcribed and encodes a functional protein.
Support Center