U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GTSE1-DT GTSE1 divergent transcript [ Homo sapiens (human) ]

Gene ID: 150384, updated on 10-Oct-2023

Summary

Official Symbol
GTSE1-DTprovided by HGNC
Official Full Name
GTSE1 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:27163
See related
Ensembl:ENSG00000277232 AllianceGenome:HGNC:27163
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CN5H6.4; GTSE1-AS1; LL22NC03-5H6.6
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
22q13.31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (46295143..46296660, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (46779840..46781357, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (46691040..46692557, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene polycystin family receptor for egg jelly Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13907 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13908 Neighboring gene tetratricopeptide repeat domain 38 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13909 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19234 Neighboring gene G2 and S-phase expressed 1 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr22:46718535-46719734 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:46731701-46732200 Neighboring gene tRNA mitochondrial 2-thiouridylase

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024009.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC015721, BY798085, Z93024
    Related
    ENST00000623117.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    46295143..46296660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    46779840..46781357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)