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ZNF295-AS1 ZNF295 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 150142, updated on 11-Jun-2021

Summary

Official Symbol
ZNF295-AS1provided by HGNC
Official Full Name
ZNF295 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:23130
See related
Ensembl:ENSG00000237232
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRED87; C21orf121; NCRNA00318
Expression
Biased expression in testis (RPKM 5.6) and adrenal (RPKM 0.4) See more
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Genomic context

See ZNF295-AS1 in Genome Data Viewer
Location:
21q22.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (42009194..42024920)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (43429303..43445029)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene PR/SET domain 15 Neighboring gene C2 calcium dependent domain containing 2 Neighboring gene small nucleolar RNA, H/ACA box 91 Neighboring gene zinc finger and BTB domain containing 21 Neighboring gene uncharacterized LOC107985502 Neighboring gene uromodulin like 1 Neighboring gene UMODL1 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort.
GeneReviews: Not available

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027273.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) contains an alternate 5' terminal exon, compared to variant 1.
    Source sequence(s)
    BC029588, BI464310
    Related
    ENST00000429739.1
  2. NR_119384.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AP001620, BC029588, BC061917, BI464310
    Related
    ENST00000412906.5
  3. NR_119385.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate 5' terminal exon, compared to variant 1.
    Source sequence(s)
    BC029588, BI464310, DB455362, HY004634
    Related
    ENST00000665885.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    42009194..42024920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_198078.1: Suppressed sequence

    Description
    NM_198078.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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