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ACA1_031660 Catalase, putative [ Acanthamoeba castellanii str. Neff ]

Gene ID: 14916637, updated on 30-Nov-2023

Summary

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Gene symbol
ACA1_031660
Gene description
Catalase, putative
Locus tag
ACA1_031660
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acanthamoeba castellanii str. Neff (strain: Neff, culture-collection: ATCC:30010)
Lineage
Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba
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Genomic context

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Location:
chromosome: Unknown
Exon count:
3

NW_004457402.1Genomic Context describing neighboring genes Neighboring gene hydrolase, alpha/beta fold domain containing protein Neighboring gene endonuclease/exonuclease/phosphatase family protein Neighboring gene TIMbarrel protein, putative Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457402.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Clarke M, et al. Genome Biol, 2013 Feb 1. PMID 23375108, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hydrogen peroxide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Catalase, putative
XP_004337981.1
  • encoded by transcript ACA1_031660A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457402.1 Reference assembly

    Range
    40415..42090 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004337933.1 → XP_004337981.1  Catalase, putative [Acanthamoeba castellanii str. Neff]

    See identical proteins and their annotated locations for XP_004337981.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H2EZP3, L8GTN6
    Conserved Domains (2) summary
    cd08156
    Location:48 → 480
    catalase_clade_3; Clade 3 of the heme-binding enzyme catalase
    COG0753
    Location:8 → 480
    KatE; Catalase [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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