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EIN_249270 transcription factor nf-Y alpha, putative [ Entamoeba invadens IP1 ]

Gene ID: 14893890, updated on 17-May-2024

Summary

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Gene symbol
EIN_249270
Gene description
transcription factor nf-Y alpha, putative
Primary source
AmoebaDB:EIN_249270
Locus tag
EIN_249270
See related
VEuPathDB:EIN_249270
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Entamoeba invadens IP1 (strain: IP1, nat-host: green water snake)
Lineage
Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_004443767.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004443767.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nuclear Factor Y (NF-Y) Modulates Encystation in Entamoeba via Stage-Specific Expression of the NF-YB and NF-YC Subunits. Manna D, et al. mBio, 2019 Jun 18. PMID 31213550, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. NF-YA (EIN_249270) was constitutively expressed both in trophozoites and in cyst.
    Title: Nuclear Factor Y (NF-Y) Modulates Encystation in Entamoeba via Stage-Specific Expression of the NF-YB and NF-YC Subunits.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor nf-Y alpha, putative
XP_004261664.1
  • encoded by transcript EIN_249270A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004443767.1 Reference assembly

    Range
    312588..313346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004261616.1 → XP_004261664.1  transcription factor nf-Y alpha, putative [Entamoeba invadens IP1]

    See identical proteins and their annotated locations for XP_004261664.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0A1UEI2
    Conserved Domains (1) summary
    pfam02045
    Location:58 → 114
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
Nucleotide Protein
Heading Accession and Version

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